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Publications

  1. Heissler SM, Selvadurai J, Bond LM, Fedorov R, Kendrick-Jones J, Buss F, Manstein DJ. Kinetic properties and small-molecular inhibition of human myosin-6. (2012) FEBS Lett. 586(19):3208-14.

  2. Preller M, Bauer S, Adamek N, Fujita-Becker S, Fedorov R, Geeves MA, Manstein DJ. Structural basis for the allosteric interference of myosin function by reactive thiol region mutations G680A and G680V. (2011) J. Biol. Chem. 286(40), 35051-35060.

  3. Chinthalapudi K, Taft MH, Martin R, Heissler SM, Preller M, Hartmann FK, Brandstaetter H, Kendrick-Jones J, Tsiavaliaris G, Gutzeit HO, Fedorov R, Buss F, Knölker HJ, Coluccio LM, Manstein DJ. Mechanism and Specificity of Pentachloropseudilin-mediated Inhibition of Myosin Motor Activity. (2011) J. Biol. Chem. 286(34), 29700-8.

  4. Naue N, Fedorov R, Pich A, Manstein DJ, Curth U. Site-directed mutagenesis of the χ subunit of DNA polymerase III and single-stranded DNA-binding protein of E. coli reveals key residues for their interaction. (2011) Nucleic Acids Res. 39(4), 1398-407.

  5. Mamta Amrute-Nayak, Ralph P. Diensthuber, Walter Steffen, Daniela Kathmann, Falk K. Hartmann, Roman Fedorov, Claus Urbanke, Dietmar J. Manstein, Bernhard Brenner, and Georgios Tsiavaliaris. Targeted optimization of a protein nanomachine for operation in biohybrid devices. (2010) Angew. Chem. Int. Ed. 49, 312-316.

  6. René Martin, Anne Jäger, Markus Böhl, Sabine Richter, Roman Fedorov, Dietmar J. Manstein, Herwig O. Gutzeit, and Hans-Joachim Knölker. Total Synthesis of Pentabromo- and Pentachloropseudilin, and Synthetic Analogues—Allosteric Inhibitors of Myosin ATPase. (2009) Angew. Chem. Int. Ed. 48, 8042 –8046.

  7. René Martin, Anne Jäger, Markus Böhl, Sabine Richter, Roman Fedorov, Dietmar J. Manstein, Herwig O. Gutzeit, and Hans-Joachim Knölker. Total Synthesis of Pentabromo- and Pentachloropseudilin, and Synthetic Analogues—Allosteric Inhibitors of Myosin ATPase. (2009) Angew. Chem. 121, 8186 –8190.

  8. Roman Fedorov, Markus Böhl, Georgios Tsiavaliaris, Falk K. Hartmann, Manuel H. Taft, Petra Baruch, Bernhard Brenner, Rene Martin, Hans-Joachim Knölker, Herwig O. Gutzeit & Dietmar J. Manstein. The mechanism of pentabromopseudilin inhibition of myosin motor activity. (2009) Nature Structural & Molecular Biology, 16, 80-88.

  9. Elena Stolboushkina, Stanislav Nikonov, Alexei Nikulin, Udo Bläsi, Dietmar J. Manstein, Roman Fedorov, Maria Garber and Oleg Nikonov. Crystal Structure of the Intact Archaeal Translation Initiation Factor 2 Demonstrates Very High Conformational Flexibility in the α- and β- Subunits. (2008) J. Mol. Biol. 382, 680-691.

  10. Gregor Witte, Roman Fedorov and Ute Curth. Biophysical analysis of Thermus aquaticus single-stranded DNA binding protein. (2008) Biophys. J., 94(6), 2269-2279.

  11. Oleg Nikonov, Elena Stolboushkina, Alexei Nikulin, David Hasenöhrl, Udo Bläsi, Dietmar J. Manstein, Roman Fedorov, Maria Garber and Stanislav Nikonov. New insights into the interactions of the translation initiation factor 2 from archaea with guanine nucleotides and initiator tRNA. (2007) J. Mol. Biol. 373(2), 328-336.

  12. Roman Fedorov, Gregor Witte, Claus Urbanke, Dietmar J. Manstein, Ute Curth. 3D structure of Thermus aquaticus single-stranded DNA-binding protein gives insight into the functioning of SSB proteins. (2006). Nucleic Acids Res 34, 6708-6717.

  13. Tatiana Domratcheva, Roman Fedorov, Ilme Schlichting. Analysis of the Primary Photocycle Reactions Occurring in the Light, Oxygen, and Voltage Blue-Light Receptor by Multiconfigurational Quantum-Chemical Methods. (2006) J. Chem. Theory Comput.; 2(6), 1565 – 1574.

  14. Hans Matter, H. S. Arun Kumar, Roman Fedorov, Armin Frey, Peter Kotsonis, Elisabeth Hartmann, Lothar G. Fröhlich, Andreas Reif, Wolfgang Pfleiderer, Peter Scheurer, Dipak K. Ghosh, Ilme Schlichting, and Harald H. H. W. Schmidt. Structural Analysis of Isoform-Specific Inhibitors Targeting the Tetrahydrobiopterin Binding Site of Human Nitric Oxide Synthases. (2005) J. Med. Chem., 48(15), 4783-4792.

  15. Michael A. Geeves, Roman Fedorov, and Dietmar J. Manstein. Actomyosin: mechanism of chemo-mechanical coupling. (2005) CMLS, Cell. Mol. Life Sci. 62, 1462-1477.

  16. Roman Fedorov, Ryan Vasan, Dipak K. Ghosh, and Ilme Schlichting. Structures of nitric oxide synthase isoforms complexed with the inhibitor AR-R17477 suggest a rational basis for specificity and inhibitor design. PNAS (2004) 101, 5892-5897.

  17. Tilman Kottke, Bernhard Dick, Roman Fedorov, Ilme Schlichting, Rainer Deutzmannm, Peter Hegemann. Irreversible Photoreduction of Flavin in a Mutated Phot-LOV1 Domain. Biochemistry (2003) 42, 9854-9862.

  18. Roman Fedorov, Elisabeth Hartmann, Dipak K. Ghosh, and Ilme Schlichting. Structural basis for the specificity of the nitric oxide synthase inhibitors W1400 and Nω-propyl-L-Arg for the inducible and neuronal isoforms. J. Biol. Chem., (2003) 278, 45818-45825.

  19. Roman Fedorov, Ilme Schlichting, Elisabeth Hartmann, Tatjana Domratcheva, Markus Fuhrmann and Peter Hegemann. Crystal structures and molecular mechanism of a light induced signaling switch: the Phot-LOV1 domain from Chlamydomonas reinhardtii. Biophysical J. (2003) 84, 2474-2482.

  20. Roman Fedorov, Dipak K. Ghosh, and Ilme Schlichting. Crystal structures of cyanide complexes of P450cam and the oxygenase domain of inducible nitric oxide synthase – structural models of the short-lived oxygen complexes. Archives of Biochemistry and Biophysics. (2003) 409, 25-31.

  21. Natalia Nevskaya, Svetlana Tishchenko, Mikhail Paveliev, Yulia Smolinskaya, Roman Fedorov, Wolfgang Piendl, Yoshikazu Nakamura, Tomohiko Toyoda, Maria Garber and Stanislav Nikonov. Structure of ribosomal protein L1 from Methanococcus thermolithotrophicus. Functionally important structural invariants on the L1 surface. Acta Cryst. (2002) D58, 1023-1029.

  22. Roman Fedorov, Vladimir Meshcheryakov, George Gongadze, Natalia Fomenkova, Natalia Nevskaya, Maria Selmer, Martin Laurberg, Ole Kristensen, Salam Al-Karadaghi, Anders Liljas, Maria Garber and Stanislav Nikonov. Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins. Acta Cryst. (2001) D57, 968-976.

  23. Natalia Davydova, Roman Fedorov, Victor Streltsov, Anders Liljas and Maria Garber. Crystals of a mutant form of ribosomal protein L22 rendering bacterial ribosomes resistant to erythromycin. Acta Cryst. (2001) D57, 1150-1152.

  24. Gongadze G.M., Perederina A.A., Meshcheryakov V.A., Fedorov R.V., Moskalenko S.E., Rak A.V., Serganov A.A., Shcherbakov D.V., Nikonov S.V., and Garber M.B. The Thermus thermophilus 5S rRNA-protein complex: Identification of specific binding sites for proteins L5 and L18 in the 5S rRNA. Molecular Biology (Moscow) (2001) 35, 610-616.

  25. Rak, A., Fedorov, R., Alexandrov, K., Albert, S., Goody, R.S., Gallwitz, D., & Scheidig, A.J. Crystal structure of the GAP domain of Gyp1p: first insights into interaction with Ypt/Rab proteins. The EMBO Journal (2000) 19(19), 5105-5113.

  26. Natalia Nevskaya, Svetlana Tishchenko, Roman Fedorov, Salam Al-Karadaghi, Anders Liljas, Alex Kraft, Wolfgang Piendl, Maria Garber and Stanislav Nikonov. Archaeal ribosomal protein L1: the structure provides new insights into RNA binding of the L1 protein family. Structure with Folding & Design (2000) 8(4), 363-371.

  27. Roman Fedorov, Natalia Nevskaya, Alphia Khairullina, Svetlana Tishchenko, Albert Mikhailov, Maria Garber and Stanislav Nikonov. Structure of ribosomal protein L30 from Thermus thermophilus at 1.9A resolution: conformational flexibility of the molecule. Acta Cryst. (1999) D55, 1827-1833.

  28. S.V.Nikonov, N.A.Nevskaya, N.P.Fomenkova, A.D.Nikulin, R.V.Fedorov, I.A.Eliseikina, S.V.Tishchenko, M.B.Garber. Structural Investigations of Bacterial Ribosomal Proteins. Surface. X-Ray, Synchrotron and Neutron Studies (1999) 2, 6-9.

  29. Chen Z., Baruch P., Mathews F.S., Matsushita K., Yamashita T., Toyama H., Adachi O. Crystallization and preliminary diffraction studies of two quinoprotein alcohol dehydrogenases (ADHs): a soluble monomeric ADH from Pseudomonas putida HK5 (ADH-IIB) and a heterotrimeric membrane-bound ADH from Gluconobacter suboxydans (ADH-GS). (1999) Acta Cryst. D55, 1933-1936.

  30. S.V.Nikonov, N.A.Nevskaya, R.V.Fedorov, A.R.Khairullina, S.V.Tishchenko, A.D.Nikulin and M. B. Garber. Structural Studies of Ribosomal Proteins. Biol. Chem. (1998) 379, 795-805.

  31. M.Garber, N.Davydova, R.Fedorov, G.Gongadze, A.Kalinin, V.Meshcheryakov, S.Moskalenko, E.Mudrik, N.Nevskaya, S.Nikonov, A.Nikulin, A.Peredelina, A.Rak, A.Serganov, D.Shcherbakov, O.Tin, S.Tishchenko, J.Vassilieva, A.Kraft, W.Piendl, C.Ehresmann, B.Ehresmann, P.Allard, M.Helgstrand, T.Hard. Ribosomal proteins: Crystallization, crystallographic and solution studies. The Proceedings of the workshop on "Structure Research of the Ribosome and its functional complexes", GKSS Research Center Greesthacht GmbH, Greesthacht, Germany,  9-11.09.1998, pp.47-51.

  32. S.V.Nikonov, N.P.Fomenkova, A.D.Nikulin, R.V.Fedorov, N.A.Nevskaya. The ribosome structure: RNA-protein and protein-protein interactions. Molecular Biology (Moscow) (1998) 32 (5), 773-781.

  33. R.V. Fedorov. Quasi-Degenerate Perturbation Theory for Intermediate Hamiltonians in application to the calculations of low-lying electronic states of Fe, Ni and Ti. Vestnik MGU, series 2, Chemistry (1997) 38 (1), 17-20.